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    Home»Machine Learning & Research»Automate superior agentic RAG pipeline with Amazon SageMaker AI
    Machine Learning & Research

    Automate superior agentic RAG pipeline with Amazon SageMaker AI

    Oliver ChambersBy Oliver ChambersSeptember 13, 2025No Comments20 Mins Read
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    Automate superior agentic RAG pipeline with Amazon SageMaker AI
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    Retrieval Augmented Era (RAG) is a elementary method for constructing superior generative AI purposes that join giant language fashions (LLMs) to enterprise information. Nevertheless, crafting a dependable RAG pipeline isn’t a one-shot course of. Groups typically want to check dozens of configurations (various chunking methods, embedding fashions, retrieval methods, and immediate designs) earlier than arriving at an answer that works for his or her use case. Moreover, administration of high-performing RAG pipeline entails advanced deployment, with groups typically utilizing handbook RAG pipeline administration, resulting in inconsistent outcomes, time-consuming troubleshooting, and issue in reproducing profitable configurations. Groups wrestle with scattered documentation of parameter decisions, restricted visibility into element efficiency, and the lack to systematically examine completely different approaches. Moreover, the dearth of automation creates bottlenecks in scaling the RAG options, will increase operational overhead, and makes it difficult to take care of high quality throughout a number of deployments and environments from improvement to manufacturing.

    On this submit, we stroll via easy methods to streamline your RAG improvement lifecycle from experimentation to automation, serving to you operationalize your RAG resolution for manufacturing deployments with Amazon SageMaker AI, serving to your workforce experiment effectively, collaborate successfully, and drive steady enchancment. By combining experimentation and automation with SageMaker AI, you may confirm that your complete pipeline is versioned, examined, and promoted as a cohesive unit. This method offers complete steering for traceability, reproducibility, and danger mitigation because the RAG system advances from improvement to manufacturing, supporting steady enchancment and dependable operation in real-world eventualities.

    Answer overview

    By streamlining each experimentation and operational workflows, groups can use SageMaker AI to quickly prototype, deploy, and monitor RAG purposes at scale. Its integration with SageMaker managed MLflow offers a unified platform for monitoring experiments, logging configurations, and evaluating outcomes, supporting reproducibility and strong governance all through the pipeline lifecycle. Automation additionally minimizes handbook intervention, reduces errors, and streamlines the method of selling the finalized RAG pipeline from the experimentation section instantly into manufacturing. With this method, each stage from knowledge ingestion to output era operates effectively and securely, whereas making it easy to transition validated options from improvement to manufacturing deployment.

    For automation, Amazon SageMaker Pipelines orchestrates end-to-end RAG workflows from knowledge preparation and vector embedding era to mannequin inference and analysis all with repeatable and version-controlled code. Integrating steady integration and supply (CI/CD) practices additional enhances reproducibility and governance, enabling automated promotion of validated RAG pipelines from improvement to staging or manufacturing environments. Selling a whole RAG pipeline (not simply a person subsystem of the RAG resolution like a chunking layer or orchestration layer) to larger environments is crucial as a result of knowledge, configurations, and infrastructure can range considerably throughout staging and manufacturing. In manufacturing, you typically work with dwell, delicate, or a lot bigger datasets, and the best way knowledge is chunked, embedded, retrieved, and generated can influence system efficiency and output high quality in methods that aren’t all the time obvious in decrease environments. Every stage of the pipeline (chunking, embedding, retrieval, and era) should be totally evaluated with production-like knowledge for accuracy, relevance, and robustness. Metrics at each stage (comparable to chunk high quality, retrieval relevance, reply correctness, and LLM analysis scores) should be monitored and validated earlier than the pipeline is trusted to serve actual customers.

    The next diagram illustrates the structure of a scalable RAG pipeline constructed on SageMaker AI, with MLflow experiment monitoring seamlessly built-in at each stage and the RAG pipeline automated utilizing SageMaker Pipelines. SageMaker managed MLflow offers a unified platform for centralized RAG experiment monitoring throughout all pipeline levels. Each MLflow execution run whether or not for RAG chunking, ingestion, retrieval, or analysis sends execution logs, parameters, metrics, and artifacts to SageMaker managed MLflow. The structure makes use of SageMaker Pipelines to orchestrate your complete RAG workflow via versioned, repeatable automation. These RAG pipelines handle dependencies between vital levels, from knowledge ingestion and chunking to embedding era, retrieval, and closing textual content era, supporting constant execution throughout environments. Built-in with CI/CD practices, SageMaker Pipelines allow seamless promotion of validated RAG configurations from improvement to staging and manufacturing environments whereas sustaining infrastructure as code (IaC) traceability.

    For the operational workflow, the answer follows a structured lifecycle: Throughout experimentation, knowledge scientists iterate on pipeline elements inside Amazon SageMaker Studio notebooks whereas SageMaker managed MLflow captures parameters, metrics, and artifacts at each stage. Validated workflows are then codified into SageMaker Pipelines and versioned in Git. The automated promotion section makes use of CI/CD to set off pipeline execution in goal environments, rigorously validating stage-specific metrics (chunk high quality, retrieval relevance, reply correctness) in opposition to manufacturing knowledge earlier than deployment. The opposite core elements embrace:

    • Amazon SageMaker JumpStart for accessing the newest LLM fashions and internet hosting them on SageMaker endpoints for mannequin inference with the embedding mannequin huggingface-textembedding-all-MiniLM-L6-v2 and textual content era mannequin deepseek-llm-r1-distill-qwen-7b.
    • Amazon OpenSearch Service as a vector database to retailer doc embeddings with the OpenSearch index configured for k-nearest neighbors (k-NN) search.
    • The Amazon Bedrock mannequin anthropic.claude-3-haiku-20240307-v1:0 as an LLM-as-a-judge element for all of the MLflow LLM analysis metrics.
    • A SageMaker Studio pocket book for a improvement atmosphere to experiment and automate the RAG pipelines with SageMaker managed MLflow and SageMaker Pipelines.

    You’ll be able to implement this agentic RAG resolution code from the GitHub repository. Within the following sections, we use snippets from this code within the repository as an instance RAG pipeline experiment evolution and automation.

    Conditions

    You should have the next conditions:

    • An AWS account with billing enabled.
    • A SageMaker AI area. For extra info, see Use fast setup for Amazon SageMaker AI.
    • Entry to a working SageMaker managed MLflow monitoring server in SageMaker Studio. For extra info, see the directions for establishing a brand new MLflow monitoring server.
    • Entry to SageMaker JumpStart to host LLM embedding and textual content era fashions.
    • Entry to the Amazon Bedrock basis fashions (FMs) for RAG analysis duties. For extra particulars, see Subscribe to a mannequin.

    SageMaker MLFlow RAG experiment

    SageMaker managed MLflow offers a robust framework for organizing RAG experiments, so groups can handle advanced, multi-stage processes with readability and precision. The next diagram illustrates the RAG experiment levels with SageMaker managed MLflow experiment monitoring at each stage. This centralized monitoring gives the next advantages:

    • Reproducibility: Each experiment is absolutely documented, so groups can replay and examine runs at any time
    • Collaboration: Shared experiment monitoring fosters information sharing and accelerates troubleshooting
    • Actionable insights: Visible dashboards and comparative analytics assist groups establish the influence of pipeline modifications and drive steady enchancment

    The next diagram illustrates the answer workflow.

    Every RAG experiment in MLflow is structured as a top-level run below a particular experiment title. Inside this top-level run, nested runs are created for every main pipeline stage, comparable to knowledge preparation, knowledge chunking, knowledge ingestion, RAG retrieval, and RAG analysis. This hierarchical method permits for granular monitoring of parameters, metrics, and artifacts at each step, whereas sustaining a transparent lineage from uncooked knowledge to closing analysis outcomes.

    The next screenshot reveals an instance of the experiment particulars in MLflow.

    The varied RAG pipeline steps outlined are:

    • Knowledge preparation: Logs dataset model, preprocessing steps, and preliminary statistics
    • Knowledge chunking: Information chunking technique, chunk dimension, overlap, and ensuing chunk counts
    • Knowledge ingestion: Tracks embedding mannequin, vector database particulars, and doc ingestion metrics
    • RAG retrieval: Captures retrieval mannequin, context dimension, and retrieval efficiency metrics
    • RAG analysis: Logs analysis metrics (comparable to reply similarity, correctness, and relevance) and pattern outcomes

    This visualization offers a transparent, end-to-end view of the RAG pipeline’s execution, so you may hint the influence of modifications at any stage and obtain full reproducibility. The structure helps scaling to a number of experiments, every representing a definite configuration or speculation (for instance, completely different chunking methods, embedding fashions, or retrieval parameters). MLflow’s experiment UI visualizes these experiments aspect by aspect, enabling side-by-side comparability and evaluation throughout runs. This construction is very useful in enterprise settings, the place dozens and even a whole bunch of experiments may be carried out to optimize RAG efficiency.

    We use MLflow experimentation all through the RAG pipeline to log metrics and parameters, and the completely different experiment runs are initialized as proven within the following code snippet:

    with mlflow.start_run() as run:
        main_run_id = run.data.run_id
        print("mlflow_run", run_id)
        with mlflow.start_run(run_name="DataPreparation", nested=True):

    RAG pipeline experimentation

    The important thing elements of the RAG workflow are ingestion, chunking, retrieval, and analysis, which we clarify on this part. The MLflow dashboard makes it easy to visualise and analyze these parameters and metrics, supporting data-driven refinement of the chunking stage throughout the RAG pipeline.

    Knowledge ingestion and preparation

    Within the RAG workflow, rigorous knowledge preparation is foundational to downstream efficiency and reliability. Monitoring detailed metrics on knowledge high quality, comparable to the entire variety of question-answer pairs, the rely of distinctive questions, common context size, and preliminary analysis predictions, offers important visibility into the dataset’s construction and suitability for RAG duties. These metrics assist validate the dataset is complete, numerous, and contextually wealthy, which instantly impacts the relevance and accuracy of the RAG system’s responses. Moreover, logging vital RAG parameters like the information supply, detected personally identifiable info (PII) sorts, and knowledge lineage info is significant for sustaining compliance, reproducibility, and belief in enterprise environments. Capturing this metadata in SageMaker managed MLflow helps strong experiment monitoring, auditability, environment friendly comparability, and root trigger evaluation throughout a number of knowledge preparation runs, as visualized within the MLflow dashboard. This disciplined method to knowledge preparation lays the groundwork for efficient experimentation, governance, and steady enchancment all through the RAG pipeline. The next screenshot reveals an instance of the experiment run particulars in MLflow.

    Knowledge chunking

    After knowledge preparation, the following step is to separate paperwork into manageable chunks for environment friendly embedding and retrieval. This course of is pivotal, as a result of the standard and granularity of chunks instantly have an effect on the relevance and completeness of solutions returned by the RAG system. The RAG workflow on this submit helps experimentation and RAG pipeline automation with each fixed-size and recursive chunking methods for comparability and validations. Nevertheless, this RAG resolution may be expanded to many different chucking methods.

    • FixedSizeChunker divides textual content into uniform chunks with configurable overlap
    • RecursiveChunker splits textual content alongside logical boundaries comparable to paragraphs or sentences

    Monitoring detailed chunking metrics comparable to total_source_contexts_entries, total_contexts_chunked, and total_unique_chunks_final is essential for understanding how a lot of the supply knowledge is represented, how successfully it’s segmented, and whether or not the chunking method is yielding the specified protection and uniqueness. These metrics assist diagnose points like extreme duplication or under-segmentation, which might influence retrieval accuracy and mannequin efficiency.

    Moreover, logging parameters comparable to chunking_strategy_type (for instance, FixedSizeChunker), chunking_strategy_chunk_size (for instance, 500 characters), and chunking_strategy_chunk_overlap present transparency and reproducibility for every experiment. Capturing these particulars in SageMaker managed MLflow helps groups systematically examine the influence of various chunking configurations, optimize for effectivity and contextual relevance, and preserve a transparent audit path of how chunking choices evolve over time. The MLflow dashboard makes it easy to visualise and analyze these parameters and metrics, supporting data-driven refinement of the chunking stage throughout the RAG pipeline. The next screenshot reveals an instance of the experiment run particulars in MLflow.

    After the paperwork are chunked, the following step is to transform these chunks into vector embeddings utilizing a SageMaker embedding endpoint, after which the embeddings are ingested right into a vector database comparable to OpenSearch Service for quick semantic search. This ingestion section is essential as a result of the standard, completeness, and traceability of what enters the vector retailer instantly decide the effectiveness and reliability of downstream retrieval and era levels.

    Monitoring ingestion metrics such because the variety of paperwork and chunks ingested offers visibility into pipeline throughput and helps establish bottlenecks or knowledge loss early within the course of. Logging detailed parameters, together with the embedding mannequin ID, endpoint used, and vector database index, is crucial for reproducibility and auditability. This metadata helps groups hint precisely which mannequin and infrastructure had been used for every ingestion run, supporting root trigger evaluation and compliance, particularly when working with evolving datasets or delicate info.

    Retrieval and era

    For a given question, we generate an embedding and retrieve the top-k related chunks from OpenSearch Service. For reply era, we use a SageMaker LLM endpoint. The retrieved context and the question are mixed right into a immediate, and the LLM generates a solution. Lastly, we orchestrate retrieval and era utilizing LangGraph, enabling stateful workflows and superior tracing:

    graph_builder = StateGraph(State).add_sequence([retrieve, generate])
    graph_with_context = graph_builder.compile()

    With the GenerativeAI agent outlined with LangGraph framework, the agentic layers are evaluated for every iteration of RAG improvement, verifying the efficacy of the RAG resolution for agentic purposes. Every retrieval and era run is logged to SageMaker managed MLflow, capturing the immediate, generated response, and key metrics and parameters comparable to retrieval efficiency, top-k values, and the precise mannequin endpoints used. Monitoring these particulars in MLflow is crucial for evaluating the effectiveness of the retrieval stage, ensuring the returned paperwork are related and that the generated solutions are correct and full. It’s equally essential to trace the efficiency of the vector database throughout retrieval, together with metrics like question latency, throughput, and scalability. Monitoring these system-level metrics alongside retrieval relevance and accuracy makes certain the RAG pipeline delivers right and related solutions and meets manufacturing necessities for responsiveness and scalability. The next screenshot reveals an instance of the Langraph RAG retrieval tracing in MLflow.

    RAG Analysis

    Analysis is carried out on a curated check set, and outcomes are logged to MLflow for fast comparability and evaluation. This helps groups establish the best-performing configurations and iterate towards production-grade options. With MLflow you may consider the RAG resolution with heuristics metrics, content material similarity metrics and LLM-as-a-judge. On this submit, we consider the RAG pipeline utilizing superior LLM-as-a-judge MLflow metrics (reply similarity, correctness, relevance, faithfulness):

    metrics_genai_only = [answer_correctness_aws, answer_similarity_aws, answer_relevance_aws, answer_faithfulness_aws]

    The next screenshot reveals an RAG analysis stage experiment run particulars in MLflow.

    You should use MLflow to log all metrics and parameters, enabling fast comparability of various experiment runs. See the next code for reference:

    with mlflow.start_run(run_id=main_run_id) as run:
        with mlflow.start_run(run_name="RAGEvaluation", nested=True):
            outcomes = mlflow.consider(
                ...         # Different parameters
                extra_metrics=metrics_genai_only,
                evaluator_config={
                    ... # Config parameters
                    }
                }
            )

    By utilizing MLflow’s analysis capabilities (comparable to mlflow.consider()), groups can systematically assess retrieval high quality, establish potential gaps or misalignments in chunking or embedding methods, and examine the efficiency of various retrieval and era configurations. MLflow’s flexibility permits for seamless integration with exterior libraries and analysis libraries comparable to RAGAS for complete RAG pipeline evaluation. RAGAS is an open supply library that present instruments particularly for analysis of LLM purposes and generative AI brokers. RAGAS consists of the tactic ragas.consider() to run evaluations for LLM brokers with the selection of LLM fashions (evaluators) for scoring the analysis, and an in depth listing of default metrics. To include RAGAS metrics into your MLflow experiments, check with the next GitHub repository.

    Evaluating experiments

    Within the MLflow UI, you may examine runs aspect by aspect. For instance, evaluating FixedSizeChunker and RecursiveChunker as proven within the following screenshot reveals variations in metrics comparable to answer_similarity (a distinction of 1 level), offering actionable insights for pipeline optimization.

    Automation with Amazon SageMaker pipelines

    After systematically experimenting with and optimizing every element of the RAG workflow via SageMaker managed MLflow, the following step is remodeling these validated configurations into production-ready automated pipelines. Though MLflow experiments assist establish the optimum mixture of chunking methods, embedding fashions, and retrieval parameters, manually reproducing these configurations throughout environments may be error-prone and inefficient.

    To provide the automated RAG pipeline, we use SageMaker Pipelines, which helps groups codify their experimentally validated RAG workflows into automated, repeatable pipelines that preserve consistency from improvement via manufacturing. By changing the profitable MLflow experiments into pipeline definitions, groups can ensure the very same chunking, embedding, retrieval, and analysis steps that carried out nicely in testing are reliably reproduced in manufacturing environments.

    SageMaker Pipelines gives a serverless workflow orchestration for changing experimental pocket book code right into a production-grade pipeline, versioning and monitoring pipeline configurations alongside MLflow experiments, and automating the end-to-end RAG workflow. The automated Sagemaker pipeline-based RAG workflow gives dependency administration, complete customized testing and validation earlier than manufacturing deployment, and CI/CD integration for automated pipeline promotion.

    With SageMaker Pipelines, you may automate your whole RAG workflow, from knowledge preparation to analysis, as reusable, parameterized pipeline definitions. This offers the next advantages:

    • Reproducibility – Pipeline definitions seize all dependencies, configurations, and executions logic in version-controlled code
    • Parameterization – Key RAG parameters (chunk sizes, mannequin endpoints, retrieval settings) may be shortly modified between runs
    • Monitoring – Pipeline executions present detailed logs and metrics for every step
    • Governance – Constructed-in lineage monitoring helps full audibility of knowledge and mannequin artifacts
    • Customization – Serverless workflow orchestration is customizable to your distinctive enterprise panorama, with scalable infrastructure and adaptability with cases optimized for CPU, GPU, or memory-intensive duties, reminiscence configuration, and concurrency optimization

    To implement a RAG workflow in SageMaker pipelines, every main element of the RAG course of (knowledge preparation, chunking, ingestion, retrieval and era, and analysis) is included in a SageMaker processing job. These jobs are then orchestrated as steps inside a pipeline, with knowledge flowing between them, as proven within the following screenshot. This construction permits for modular improvement, fast debugging, and the power to reuse elements throughout completely different pipeline configurations.

    The important thing RAG configurations are uncovered as pipeline parameters, enabling versatile experimentation with minimal code modifications. For instance, the next code snippets showcase the modifiable parameters for RAG configurations, which can be utilized as pipeline configurations:

    processor  PyTorchProcessor(
        ...
        arguments[
        "--experiment-name", experiment_name,
        "--mlflow-tracking-uri", mlflow_tracking_uri,
        "--embedding-endpoint-name", embedding_endpoint_name,
        "--text-endpoint-name", text_endpoint_name,
        "--domain-name", domain_name,
        "--index-name", index_name,
        "--chunking-strategy", chunking_strategy,
        "--chunk-size", chunk_size,
        "--chunk-overlap", chunk_overlap,
        "--context-retrieval-size", context_retrieval_size,
        "--embedding-model-id", embedding_model_id,
        "--text-model-id", text_model_id,
        "--output-data-path", "/opt/ml/processing/output",
        "--role-arn", role
        ],
    )

    On this submit, we offer two agentic RAG pipeline automation approaches to constructing the SageMaker pipeline, every with personal advantages: single-step SageMaker pipelines and multi-step pipelines.

    The one-step pipeline method is designed for simplicity, working your complete RAG workflow as one unified course of. This setup is good for easy or much less advanced use instances, as a result of it minimizes pipeline administration overhead. With fewer steps, the pipeline can begin shortly, benefitting from diminished execution instances and streamlined improvement. This makes it a sensible possibility when speedy iteration and ease of use are the first considerations.

    The multi-step pipeline method is most well-liked for enterprise eventualities the place flexibility and modularity are important. By breaking down the RAG course of into distinct, manageable levels, organizations acquire the power to customise, swap, or prolong particular person elements as wants evolve. This design permits plug-and-play adaptability, making it easy to reuse or reconfigure pipeline steps for varied workflows. Moreover, the multi-step format permits for granular monitoring and troubleshooting at every stage, offering detailed insights into efficiency and facilitating strong enterprise administration. For enterprises searching for most flexibility and the power to tailor automation to distinctive necessities, the multi-step pipeline method is the superior selection.

    CI/CD for an agentic RAG pipeline

    Now we combine the SageMaker RAG pipeline with CI/CD. CI/CD is essential for making a RAG resolution enterprise-ready as a result of it offers quicker, extra dependable, and scalable supply of AI-powered workflows. Particularly for enterprises, CI/CD pipelines automate the mixing, testing, deployment, and monitoring of modifications within the RAG system, which brings a number of key advantages, comparable to quicker and extra dependable updates, model management and traceability, consistency throughout environments, modularity and adaptability for personalisation, enhanced collaboration and monitoring, danger mitigation, and price financial savings. This aligns with common CI/CD advantages in software program and AI techniques, emphasizing automation, high quality assurance, collaboration, and steady suggestions important to enterprise AI readiness.

    When your SageMaker RAG pipeline definition is in place, you may implement strong CI/CD practices by integrating your improvement workflow and toolsets already enabled at your enterprise. This setup makes it attainable to automate code promotion, pipeline deployment, and mannequin experimentation via easy Git triggers, so modifications are versioned, examined, and systematically promoted throughout environments. For demonstration, on this submit, we present the CI/CD integration utilizing GitHub Actions and through the use of GitHub Actions because the CI/CD orchestrator. Every code change, comparable to refining chunking methods or updating pipeline steps, triggers an end-to-end automation workflow, as proven within the following screenshot. You should use the identical CI/CD sample together with your selection of CI/CD software as an alternative of GitHub Actions, if wanted.

    Every GitHub Actions CI/CD execution mechanically triggers the SageMaker pipeline (proven within the following screenshot), permitting for seamless scaling of serverless compute infrastructure.

    All through this cycle, SageMaker managed MLflow data each executed pipeline (proven within the following screenshot), so you may seamlessly overview outcomes, examine efficiency throughout completely different pipeline runs, and handle the RAG lifecycle.

    After an optimum RAG pipeline configuration is decided, the brand new desired configuration (Git model monitoring captured in MLflow as proven within the following screenshot) may be promoted to larger levels or environments instantly via an automatic workflow, minimizing handbook intervention and decreasing danger.

    Clear up

    To keep away from pointless prices, delete sources such because the SageMaker managed MLflow monitoring server, SageMaker pipelines, and SageMaker endpoints when your RAG experimentation is full. You’ll be able to go to the SageMaker Studio console to destroy sources that aren’t wanted anymore or name acceptable AWS APIs actions.

    Conclusion

    By integrating SageMaker AI, SageMaker managed MLflow, and Amazon OpenSearch Service, you may construct, consider, and deploy RAG pipelines at scale. This method offers the next advantages:

    • Automated and reproducible workflows with SageMaker Pipelines and MLflow, minimizing handbook steps and decreasing the chance of human error
    • Superior experiment monitoring and comparability for various chunking methods, embedding fashions, and LLMs, so each configuration is logged, analyzed, and reproducible
    • Actionable insights from each conventional and LLM-based analysis metrics, serving to groups make data-driven enhancements at each stage
    • Seamless deployment to manufacturing environments, with automated promotion of validated pipelines and strong governance all through the workflow

    Automating your RAG pipeline with SageMaker Pipelines brings further advantages: it permits constant, version-controlled deployments throughout environments, helps collaboration via modular, parameterized workflows, and helps full traceability and auditability of knowledge, fashions, and outcomes. With built-in CI/CD capabilities, you may confidently promote your whole RAG resolution from experimentation to manufacturing, figuring out that every stage meets high quality and compliance requirements.

    Now it’s your flip to operationalize RAG workflows and speed up your AI initiatives. Discover SageMaker Pipelines and managed MLflow utilizing the answer from the GitHub repository to unlock scalable, automated, and enterprise-grade RAG options.


    About the authors

    Sandeep Raveesh is a GenAI Specialist Options Architect at AWS. He works with prospects via their AIOps journey throughout mannequin coaching, generative AI purposes like brokers, and scaling generative AI use instances. He additionally focuses on Go-To-Market methods, serving to AWS construct and align merchandise to resolve business challenges within the generative AI area. You will discover Sandeep on LinkedIn.

    Blake Shin is an Affiliate Specialist Options Architect at AWS who enjoys studying about and dealing with new AI/ML applied sciences. In his free time, Blake enjoys exploring town and enjoying music.

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